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Waukon Iowa Accommodations

Find the perfect hotel in Waukon using our hotel guide provided below. Explore our guide for inexpensive and discount hotel/motel rates in or near Waukon, IA for your business or personal leisure travel. We provide the best Waukon Iowa hotel/motel rooms. Review the Waukon hotel list below to find the perfect lodging. We also have a map of the Waukon hotels.

The Waukon center point is around 16 miles east of Luther College and 21 miles northwest of Villa Louis Historic Site.

Waukon Hotels/Accommodations

Boarders Inn & Suites by Cobblestone Hotels Waukon 407 Rossville Rd., Waukon, IA 52172
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  • 3 star hotel
  • Check-in: 03:00pm
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From$80
Very Good 4.0 /5 Reviews Call BookMore Details
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Super 8 by Wyndham Decorah - Decorah 810 Highway 9 East, Decorah, IA 52101
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~14.98 miles west of Waukon
  • Low priced Downtown property
  • 4 suites in property
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From$69
Average 3.5 /5 Guest Reviews Call BookMore Details
Quality Inn & Suites Decorah : 705 Commerce Dr. 705 Commerce Dr., Decorah, IA 52101
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~15.17 miles west of Waukon
  • Low-priced Downtown hotel
  • 58 rooms in property
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From$100
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Hotel Winneshiek in Decorah 104 East Water St., Decorah, IA 52101
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~15.81 miles west of Waukon
  • Mid-scale Downtown hotel
  • 2 conference rooms in property
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From$129
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Country Inn & Suites by Radisson, Decorah, IA 2042 State Highway 9, Decorah, IA 52101
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~16.49 miles west of Waukon
  • Affordable Rural property
  • Fitness + Health Center
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From$85
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Comfort Inn & Suites Marquette Prairie Du Chien - Marquette 100 North St., Marquette, IA 52158
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~21.52 miles southeast of Waukon
  • 3 star Riverfront hotel
  • 4 floors in hotel
More Photos Image of Comfort Inn & Suites Marquette Prairie Du Chien
From$95
Average 3.0 /5 Recent Reviews Call BookMore Details
Country Inn & Suites by Radisson, Prairie du Chien in Prairie Du Chien 1801 Cabela South Ln, Prairie Du Chien, WI 53821
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~21.62 miles southeast of Waukon
  • Midscale Rural property
  • Check-in time: 3:00 p.m.
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From$84
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Motel 6 Prairie Du Chien, WI 533 North Marquette Rd., Prairie Du Chien, WI 53821
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~22.23 miles southeast of Waukon
  • 2-star Riverfront hotel
  • Hotel has 43 rooms
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From$42
Very Good 4.0 /5 Review Score Call BookMore Details
Microtel Inn & Suites by Wyndham Prairie Du Chien in Prairie Du Chien 1833 South Marquette Rd., Prairie Du Chien, WI 53821
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~23.93 miles southeast of Waukon
  • Economical Downtown hotel
  • Check in time: 3:00 PM
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From$60
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Super 8 by Wyndham Prairie Du Chien : 1930 South Marquette Rd. 1930 South Marquette Rd., Prairie Du Chien, WI 53821
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~24.15 miles southeast of Waukon
  • Cheap hotel
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From$60
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Quality Inn & Suites - Prairie Du Chien 37268 Us 18, Prairie Du Chien, WI 53821
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~24.40 miles southeast of Waukon
  • 3-star property
  • Check-in time: 15:00 PM
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From$55
Average 3.5 /5 Guest Reviews Call BookMore Details
Big River Inn Hotel - Genoa 501 Water St., Genoa, WI 54632
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~24.48 miles northeast of Waukon
  • Economical Riverfront hotel
  • Hotel has 5 suites
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From$31
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Americinn by Wyndham Prairie Du Chien 37502 Us Highway 18, Prairie Du Chien, WI 53821
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~24.60 miles southeast of Waukon
  • Cheap hotel
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From$60
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Super 8 by Wyndham Cresco Ia - Cresco 511 2nd Ave. Se, Cresco, IA 52136
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~32.63 miles west of Waukon
  • Economical Rural property
  • Hotel has a green policy Learn more
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From$79
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Boarders Inn & Suites by Cobblestone Hotels - Fayette in Fayette 515 Half West Water St., Fayette, IA 52142
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~35.18 miles southwest of Waukon
  • Affordable Rural hotel
  • Hotel has 41 rooms
More Photos Photo of Boarders Inn & Suites by Cobblestone Hotels - Fayette
From$90
Very Good 4.0 /5 Latest Reviews Call BookMore Details
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Norwood Inn La Crosse 101 Sky Harbour Dr., La Crosse, WI 54603
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~38.51 miles north of Waukon
  • Midscale Airport hotel
  • Check-in time: 3:00 p.m.
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From$55
Average 3.0 /5 Guest Reviews Call BookMore Details
Courtyard by Marriott La Crosse 500 Front St. South, La Crosse, WI 54601
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~38.79 miles north of Waukon
  • Midscale Downtown hotel
  • Fitness + Health Center
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From$144
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Fairfield Inn & Suites by Marriott La Crosse Downtown - La Crosse 434 3rd St. South, La Crosse, WI 54601
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~38.82 miles north of Waukon
  • Affordable Downtown property
  • Fitness center on property
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From$80
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Home2 Suites by Hilton La Crosse : 210 Jay St. 210 Jay St., La Crosse, WI 54601
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~38.89 miles north of Waukon
  • Mid-scale Downtown hotel
  • 107 suites in hotel
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From$89
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Holiday Inn Hotel & Suites La Crosse, an IHG Hotel : 200 Pearl St. 200 Pearl St., La Crosse, WI 54601
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~39.02 miles north of Waukon
  • 3 star Downtown property
  • 37 suites in hotel
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From$89
Very Good 4.0 /5 Read Reviews Call BookMore Details
Radisson Hotel La Crosse 200 Harborview Plaza, La Crosse, WI 54601 Website
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~39.07 miles north of Waukon
  • Midscale Downtown property
  • Check-in: 3:00 PM
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From$80
Average 3.0 /5 Recent Reviews Call BookMore Details
Gundersen Hotel & Suites : 1520 Clinic Court 1520 Clinic Court, La Crosse, WI 54601
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~39.11 miles north of Waukon
  • 2-star hotel
  • Hotel has 67 rooms
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From$99
Average 3.0 /5 Reviews Call BookMore Details
The Charmant Hotel : 101 State St. 101 State St., La Crosse, WI 54601
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~39.18 miles north of Waukon
  • High end Riverfront hotel
  • Hotel has 5 floors
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From$149
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Hampton Inn & Suites La Crosse Downtown in La Crosse 511 3rd St. North, La Crosse, WI 54601
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~39.36 miles north of Waukon
  • Affordable Downtown hotel
  • Hotel has 126 rooms
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From$105
Excellent 5.0 /5 Reviews Call BookMore Details
Grandstay Hotel & Suites in La Crosse 525 Front St. North, La Crosse, WI 54601
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~39.42 miles north of Waukon
  • Mid-scale Downtown hotel
  • 55 suites in property
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From$85
Very Good 4.0 /5 Reviews Call BookMore Details
Americinn by Wyndham Boscobel - Boscobel 1700 Elm St., Boscobel, WI 53805
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~39.73 miles east of Waukon
  • Mid-scale Convention Center property
  • 2 meeting rooms in hotel
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From$75
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Old Towne Motel in Westby 102 East Old Town Rd., Westby, WI 54667
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~39.81 miles northeast of Waukon
  • Economical hotel
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From$60
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Candlewood Suites La Crosse An Ihg Hotel 56 Copeland Ave., La Crosse, WI 54603
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~39.85 miles north of Waukon
  • Low priced Downtown property
  • Hotel has 4 floors
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From$60
Very Good 4.0 /5 Guest Reviews Call BookMore Details
Best Western Plus LaCrescent / LaCrosse 509 North Chestnut St., La Crescent, MN 55947
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~39.94 miles north of Waukon
  • Three Star Highway property
  • Free breakfast
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From$66
Excellent 5.0 /5 Guest Reviews Call BookMore Details
Super 8 by Wyndham La Crosse : 1625 Rose St. 1625 Rose St., La Crosse, WI 54603
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~41.39 miles north of Waukon
  • Low-priced Highway property
  • Hotel has 7 suites
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From$50
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Americinn by Wyndham La Crosse Riverfront Conference Center in La Crosse 1835 Rose St., La Crosse, WI 54669
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~41.59 miles north of Waukon
  • Low priced Riverfront property
  • Airport shuttle provided
More Photos Photo of Americinn by Wyndham La Crosse Riverfront Conference Center
From$99
Average 3.0 /5 Reviews Call BookMore Details
Quality Inn La Crosse North : 1830 Rose St. 1830 Rose St., La Crosse, WI 54603 Website
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~41.61 miles north of Waukon
  • Midscale Convention Center property
  • Hotel has 3 floors
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From$72
Average 3.0 /5 Latest Reviews Call BookMore Details
Econo Lodge La Crosse North in La Crosse 1906 Rose St., La Crosse, WI 54603
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~41.63 miles north of Waukon
  • 2 star Convention Center hotel
  • Check-in: 3:00pm
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From$55
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Country Inn & Suites by Radisson, La Crosse, WI - La Crosse 2110 Rose St., La Crosse, WI 54603
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~41.86 miles north of Waukon
  • Mid-scale Highway hotel
  • 2 floors in property
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From$79
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Days Inn by Wyndham La Crosse - La Crosse 2150 Rose St., La Crosse, WI 54603
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~41.91 miles north of Waukon
  • 2 star Riverfront hotel
  • Free breakfast available
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From$60
Average 3.5 /5 Guest Reviews Call BookMore Details
Blue Way Inn & Suites La Crosse in La Crosse 101 Building 1 Sky Harbour Dr., La Crosse, WI 54603
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~42.07 miles north of Waukon
  • Inexpensive hotel
  • Complimentary breakfast is offered
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From$50
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Americas Best Value Inn La Crosse - La Crosse 2622 Rose St., La Crosse, WI 54603
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~42.34 miles north of Waukon
  • Low priced Highway property
  • 3 suites in hotel
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From$44
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Coratel Inn & Suites by Jasper La Crosse Building 2 101, La Crosse, WI 54603
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~42.53 miles north of Waukon
  • Cheap property
  • Comp. Breakfast
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From$50
Average 3.0 /5 Recent Reviews Call BookMore Details
Comfort Inn Onalaska La Crosse - Onalaska 1223 Crossing Meadows Dr., Onalaska, WI 54650 Website
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~43.49 miles north of Waukon
  • Midscale Highway property
  • Check-in: 3:00pm
More Photos Photo of Comfort Inn Onalaska La Crosse
From$80
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Days Inn & Suites by Wyndham Onalaska / La Crosse 9409 Wi 16, Onalaska, WI 54650
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~43.85 miles north of Waukon
  • Affordable Suburban property
  • Free complimentary breakfast
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From$109
Very Good 4.0 /5 Guest Reviews Call BookMore Details
Stoney Creek Hotel La Crosse - Onalaska in Onalaska 3060 South Kinney Coulee Rd., Onalaska, WI 54650
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~44.10 miles north of Waukon
  • Inexpensive Airport hotel
  • 8 meeting rooms in hotel
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From$60
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Stoney Creek Hotel La Crosse Onalaska - Onalaska 1306 South Kinney Coulee Rd., Onalaska, WI 54650
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~44.20 miles north of Waukon
  • High end Airport hotel
  • Hotel has 157 rooms
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From$125
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Holiday Inn Express & Suites Onalaska La Crosse 2614 Midwest Dr., Onalaska, WI 54650
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~44.26 miles north of Waukon
  • Three Star hotel
  • Gym is available on property
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From$80
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Hampton Inn Lacrosse/Onalaska : 308 Hampton Court 308 Hampton Court, Onalaska, WI 54650
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~44.31 miles north of Waukon
  • Three Star Highway hotel
  • Check-in: 2:00 PM
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From$80
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Microtel Inn by Wyndham Onalaska/La Crosse 3240 North Kinney Coulee Rd., Onalaska, WI 54650
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~44.46 miles north of Waukon
  • 2 star Suburban property
  • Check-in: 3:00 pm
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From$60
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Baymont by Wyndham La Crosse / Onalaska : 3300 North Kinney Coulee Rd. 3300 North Kinney Coulee Rd., Onalaska, WI 54650
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~44.50 miles north of Waukon
  • Cheap Highway hotel
  • Hotel has 3 floors
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From$64
Average 3.5 /5 Guest Reviews Call BookMore Details
Baymont by Wyndham La Crosse/Onalaska 3300 Kinney Coulee Rd. North, Onalaska, WI 54650
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~44.54 miles north of Waukon
  • Economical Highway hotel
  • Check in time: 12:00 PM
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From$60
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Next: See My Waukon Hotels with Pricing

Bar Chart: Upcoming 20 Days of Waukon Hotel Rates

Rates shown are nightly rates before taxes and do not necessarily reflect all Waukon, IA discounts available. The chart reflects the cheapest Waukon hotel for each day and each star rating category.

FAQs about hotels in Waukon

What are the most favored hotels in Waukon?

Hampton Inn & Suites La Crosse Downtown, Best Western Plus LaCrescent and Home2 Suites by Hilton La Crosse are the best rated hotels based on customer reviews in the last 365 days.

What are the 4-5 star hotels in Waukon?

The Charmant Hotel, Stoney Creek Hotel La Crosse Onalaska and Boarders Inn & Suites by Cobblestone Hotels Waukon are the top 3 luxury hotels near Waukon city center.

What hotels are closest to the city center of Waukon?

Boarders Inn & Suites by Cobblestone Hotels Waukon, Super 8 by Wyndham Decorah, and Quality Inn & Suites Decorah are the properties closest to Waukon city center.

What are the most popular independent hotels in Waukon?

Boarders Inn & Suites by Cobblestone Hotels Waukon, Hotel Winneshiek and Boarders Inn & Suites by Cobblestone Hotels - Fayette are the best rated independent hotels (not part of a big brand).

What are the most popular Marriott hotels in Waukon?

Courtyard by Marriott La Crosse and Fairfield Inn & Suites by Marriott La Crosse Downtown are the best rated Marriott/Starwood branded hotels (based on customer reviews score).

What are the most popular Choice Hotels branded hotels in Waukon?

Quality Inn & Suites Decorah, Comfort Inn Onalaska La Crosse and Quality Inn & Suites are the best rated Choice Hotels branded hotels (based on HotelPlanner reviews score).

What are the best IHG hotels in Waukon?

Candlewood Suites La Crosse An Ihg Hotel and Holiday Inn Express & Suites Onalaska La Crosse are the best rated Intercontinental Hotel Group (IHG) branded hotels (based on user reviews score).

Recent traveler reviews of Waukon, IA

Below are reviews of the city of Waukon, IA from an actual visitor's perspective.

"Town is friendly"
Score 5.0 / 5

Gail L., from 10-Oct-2025
"It Is A Very Nice Small Town"
Score 5.0 / 5

I went here for a wedding and was very impressed. I like going to small towns and meeting the locals. I will be back again for sure.

Theresa F., from 26-Aug-2025
"Nice Quiet Town"
Score 5.0 / 5

Nice quiet town

Dan A., from 19-Aug-2025
"Lovely town with beautiful scenery!"
Score 4.0 / 5

Warm people, lovely active town with beautiful scenery.

Darla T., from 24-Jul-2024
The average traveler rating of the city of Waukon, IA shown above is 4.8 out of 5 based on 4 reviews
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