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Waukon Iowa Accommodations

Find the perfect hotel in Waukon using our hotel guide provided below. Explore our guide for inexpensive and discount hotel/motel rates in or near Waukon, IA for your business or personal leisure travel. We provide the best Waukon Iowa hotel/motel rooms. Review the Waukon hotel list below to find the perfect lodging. We also have a map of the Waukon hotels.

The Waukon center point is around 16 miles east of Luther College and 21 miles northwest of Villa Louis Historic Site.

Waukon Hotels/Accommodations

Boarders Inn & Suites by Cobblestone Hotels Waukon in Waukon
+1-888-389-4121
407 Rossville Rd., Waukon, IA 52172
  • 3 star property
  • Hotel has 38 rooms
From$80
Very Good 4.0 /5 Read Reviews Call BookMore Details
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Super 8 by Wyndham Decorah
+1-888-675-2083
810 Highway 9 East, Decorah, IA 52101 ~14.98 miles west of Waukon
  • Cheap Downtown property
  • Check-in time: 2:00 PM
From$69
Average 3.5 /5 Reviews Call BookMore Details
Quality Inn & Suites Decorah in Decorah
+1-800-716-8490
705 Commerce Dr., Decorah, IA 52101 ~15.17 miles west of Waukon
  • Economical Downtown property
  • Free breakfast available
From$100
Very Good 4.0 /5 Guest Reviews Call BookMore Details
Hotel Winneshiek : 104 East Water St.
+1-800-805-5223
104 East Water St., Decorah, IA 52101 ~15.81 miles west of Waukon
  • 3-star Downtown hotel
  • 34 sleeping rooms in hotel
From$129
Very Good 4.0 /5 Reviews Call BookMore Details
Country Inn & Suites by Radisson, Decorah, IA : 2042 State Highway 9
+1-888-965-1860
2042 State Highway 9, Decorah, IA 52101 ~16.49 miles west of Waukon
  • Midscale Rural hotel
  • Access to gym on-site
From$85
Very Good 4.0 /5 Read Reviews Call BookMore Details
Cobblestone Inn & Suites Marquette / Prairie Du Chien : 100 North St.
+1-888-788-5576
100 North St., Marquette, IA 52158 ~21.52 miles southeast of Waukon
  • Midscale Riverfront hotel
  • Comp. Breakfast
From$95
Average 3.0 /5 Recent Reviews Call BookMore Details
Country Inn & Suites by Radisson, Prairie du Chien - Prairie Du Chien
+1-888-897-9207
1801 Cabela South Ln, Prairie Du Chien, WI 53821 ~21.62 miles southeast of Waukon
  • Midscale Rural property
  • 64 rooms in hotel
From$84
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Motel 6 Prairie Du Chien, WI in Prairie Du Chien
+1-888-311-4278
533 North Marquette Rd., Prairie Du Chien, WI 53821 ~22.23 miles southeast of Waukon
  • Low-priced Riverfront hotel
  • Has environment-friendly policy Read more
From$42
Very Good 4.0 /5 Guest Reviews Call BookMore Details
Microtel Inn & Suites by Wyndham Prairie Du Chien in Prairie Du Chien
+1-888-469-4795
1833 South Marquette Rd., Prairie Du Chien, WI 53821 ~23.93 miles southeast of Waukon
  • Economy Downtown hotel
  • Check in: 3:00 PM
From$60
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Super 8 by Wyndham Prairie Du Chien
+1-888-734-9421
1930 South Marquette Rd., Prairie Du Chien, WI 53821 ~24.15 miles southeast of Waukon
  • Two-star hotel
From$60
Very Good 4.0 /5 Reviews Call BookMore Details
Quality Inn & Suites
+1-888-841-5292
37268 Us 18, Prairie Du Chien, WI 53821 ~24.40 miles southeast of Waukon
  • Affordable property
  • Gym is available on property
From$55
Average 3.5 /5 Read Reviews Call BookMore Details
Big River Inn Hotel
+1-888-455-5160
501 Water St., Genoa, WI 54632 ~24.48 miles northeast of Waukon
  • Low priced Riverfront property
  • 5 suites in hotel
From$31
Average 3.0 /5 Guest Reviews Call BookMore Details
Americinn by Wyndham Prairie Du Chien
+1-888-965-8297
37502 Us Highway 18, Prairie Du Chien, WI 53821 ~24.60 miles southeast of Waukon
  • Low priced hotel
From$60
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Super 8 by Wyndham Cresco Ia in Cresco
+1-888-906-6358
511 2nd Ave. Se, Cresco, IA 52136 ~32.63 miles west of Waukon
  • Economical Rural hotel
  • 5 suites in property
From$79
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Boarders Inn & Suites by Cobblestone Hotels - Fayette
+1-888-749-6785
515 Half West Water St., Fayette, IA 52142 ~35.18 miles southwest of Waukon
  • Affordable Rural property
  • Check in: 15:00
From$90
Very Good 4.0 /5 Read Reviews Call BookMore Details
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Norwood Inn La Crosse
+1-888-878-9982
101 Sky Harbour Dr., La Crosse, WI 54603 ~38.51 miles north of Waukon
  • Midscale Airport hotel
  • 59 sleeping rooms in hotel
From$55
Average 3.0 /5 Guest Reviews Call BookMore Details
Courtyard by Marriott La Crosse in La Crosse
+1-888-389-4485
500 Front St. South, La Crosse, WI 54601 ~38.79 miles north of Waukon
  • 3 star Downtown hotel
  • 4 suites in hotel
From$144
Very Good 4.0 /5 Review Score Call BookMore Details
Fairfield Inn & Suites by Marriott La Crosse Downtown
+1-888-389-4121
434 3rd St. South, La Crosse, WI 54601 ~38.82 miles north of Waukon
  • Three Star Downtown property
  • 92 sleeping rooms in hotel
From$80
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Home2 Suites by Hilton La Crosse in La Crosse
+1-888-675-2083
210 Jay St., La Crosse, WI 54601 ~38.89 miles north of Waukon
  • Affordable Downtown property
  • Check-in time: 3:00
From$89
Very Good 4.5 /5 Latest Reviews Call BookMore Details
Holiday Inn Hotel & Suites La Crosse, an IHG Hotel - La Crosse
+1-800-716-8490
200 Pearl St., La Crosse, WI 54601 ~39.02 miles north of Waukon
  • Midscale Downtown hotel
  • 37 suites in property
From$89
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Radisson Hotel La Crosse - La Crosse
+1-800-805-5223
200 Harborview Plaza, La Crosse, WI 54601 Website ~39.07 miles north of Waukon
  • Midscale Downtown property
  • Hotel has 2 suites
From$80
Average 3.0 /5 Reviews Call BookMore Details
Gundersen Hotel & Suites : 1520 Clinic Court
+1-888-965-1860
1520 Clinic Court, La Crosse, WI 54601 ~39.11 miles north of Waukon
  • Two star property
  • 67 rooms in property
From$99
Average 3.0 /5 Recent Reviews Call BookMore Details
The Charmant Hotel : 101 State St.
+1-888-788-5576
101 State St., La Crosse, WI 54601 ~39.18 miles north of Waukon
  • Four star Riverfront hotel
  • Hotel has 5 floors
From$149
Very Good 4.0 /5 Read Reviews Call BookMore Details
Hampton Inn & Suites La Crosse Downtown : 511 3rd St. North
+1-888-897-9207
511 3rd St. North, La Crosse, WI 54601 ~39.36 miles north of Waukon
  • Midscale Downtown hotel
  • Shuttle from airport available
From$105
Excellent 5.0 /5 Hotel Reviews Call BookMore Details
Grandstay Hotel & Suites in La Crosse
+1-888-311-4278
525 Front St. North, La Crosse, WI 54601 ~39.42 miles north of Waukon
  • Midscale Downtown hotel
  • Check-in: 11:00am
From$85
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Americinn by Wyndham Boscobel
+1-888-469-4795
1700 Elm St., Boscobel, WI 53805 ~39.73 miles east of Waukon
  • 3 star Convention Center hotel
  • Fitness center on property
From$75
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Old Towne Motel in Westby
+1-888-734-9421
102 East Old Town Rd., Westby, WI 54667 ~39.81 miles northeast of Waukon
  • Cheap property
From$60
Average 3.0 /5 Hotel Reviews Call BookMore Details
Candlewood Suites La Crosse An Ihg Hotel in La Crosse
+1-888-841-5292
56 Copeland Ave., La Crosse, WI 54603 ~39.85 miles north of Waukon
  • Inexpensive Downtown hotel
  • Check-in time: 3:00PM
From$60
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Best Western Plus LaCrescent / LaCrosse - La Crescent
+1-888-455-5160
509 North Chestnut St., La Crescent, MN 55947 ~39.94 miles north of Waukon
  • 3-star Highway property
  • Free complimentary breakfast
From$66
Excellent 5.0 /5 Latest Reviews Call BookMore Details
Super 8 by Wyndham La Crosse in La Crosse
+1-888-965-8297
1625 Rose St., La Crosse, WI 54603 ~41.39 miles north of Waukon
  • Economical Highway property
  • 7 suites in hotel
From$50
Average 3.0 /5 Read Reviews Call BookMore Details
Americinn by Wyndham La Crosse Riverfront Conference Center : 1835 Rose St.
+1-888-906-6358
1835 Rose St., La Crosse, WI 54669 ~41.59 miles north of Waukon
  • Low priced Riverfront hotel
  • Check-in: 3pm
From$99
Average 3.0 /5 Reviews Call BookMore Details
Quality Inn La Crosse North : 1830 Rose St.
+1-888-749-6785
1830 Rose St., La Crosse, WI 54603 Website ~41.61 miles north of Waukon
  • 3-star Convention Center hotel
  • Access to gym on-site
From$72
Average 3.0 /5 Reviews Call BookMore Details
Econo Lodge La Crosse North : 1906 Rose St.
+1-888-878-9982
1906 Rose St., La Crosse, WI 54603 ~41.63 miles north of Waukon
  • Low Cost Convention Center hotel
  • Free breakfast available
From$55
Average 3.0 /5 Read Reviews Call BookMore Details
Country Inn & Suites by Radisson, La Crosse, WI in La Crosse
+1-888-389-4485
2110 Rose St., La Crosse, WI 54603 ~41.86 miles north of Waukon
  • Mid-scale Highway property
  • Check in time: 3:00 PM
From$79
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Motel 6 La Crosse, WI in La Crosse
+1-888-389-4121
2150 Rose St., La Crosse, WI 54603 ~41.91 miles north of Waukon
  • Low Cost Riverfront property
  • Fitness center on property
From$60
Average 3.5 /5 Review Score Call BookMore Details
Blue Way Inn & Suites La Crosse
+1-888-675-2083
101 Building 1 Sky Harbour Dr., La Crosse, WI 54603 ~42.07 miles north of Waukon
  • Low priced property
  • Check-in: 3:00 PM
From$50
Average 3.0 /5 Guest Reviews Call BookMore Details
Americas Best Value Inn La Crosse in La Crosse
+1-800-716-8490
2622 Rose St., La Crosse, WI 54603 ~42.34 miles north of Waukon
  • Low Cost Highway property
  • Hotel has 2 floors
Coratel Inn & Suites by Jasper La Crosse - La Crosse
+1-800-805-5223
Building 2 101, La Crosse, WI 54603 ~42.53 miles north of Waukon
  • Economical property
  • 10 rooms in hotel
From$50
Average 3.0 /5 Read Reviews Call BookMore Details
Comfort Inn Onalaska La Crosse in Onalaska
+1-888-965-1860
1223 Crossing Meadows Dr., Onalaska, WI 54650 Website ~43.49 miles north of Waukon
  • Midscale Highway property
  • 12 suites in hotel
From$80
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Days Inn & Suites by Wyndham Onalaska / La Crosse in Onalaska
+1-888-788-5576
9409 Wi 16, Onalaska, WI 54650 ~43.85 miles north of Waukon
  • Midscale Suburban hotel
  • 3 floors in hotel
From$109
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Stoney Creek Hotel & Conference Center
+1-888-897-9207
3060 South Kinney Coulee Rd., Onalaska, WI 54650 ~44.10 miles north of Waukon
  • 2-star Airport hotel
  • 8 meeting rooms in property
From$60
Average 3.0 /5 Hotel Reviews Call BookMore Details
Stoney Creek Hotel La Crosse Onalaska - Onalaska
+1-888-311-4278
1306 South Kinney Coulee Rd., Onalaska, WI 54650 ~44.20 miles north of Waukon
  • Four star Airport property
  • Hotel has 4 floors
From$125
Average 3.0 /5 Guest Reviews Call BookMore Details
Holiday Inn Express & Suites Onalaska La Crosse
+1-888-469-4795
2614 Midwest Dr., Onalaska, WI 54650 ~44.26 miles north of Waukon
  • Mid-scale hotel
  • Gym is available on property
From$80
Average 3.0 /5 Guest Reviews Call BookMore Details
Hampton Inn Lacrosse/Onalaska - Onalaska
+1-888-734-9421
308 Hampton Court, Onalaska, WI 54650 ~44.31 miles north of Waukon
  • 3-star Highway hotel
  • Fitness / Gym is on-site
From$80
Very Good 4.0 /5 Reviews Call BookMore Details
Microtel Inn by Wyndham Onalaska/La Crosse
+1-888-841-5292
3240 North Kinney Coulee Rd., Onalaska, WI 54650 ~44.46 miles north of Waukon
  • Economy Suburban property
  • Check in: 3:00 pm
From$60
Average 3.0 /5 Reviews Call BookMore Details
Baymont by Wyndham La Crosse / Onalaska - Onalaska
+1-888-455-5160
3300 North Kinney Coulee Rd., Onalaska, WI 54650 ~44.50 miles north of Waukon
  • Low Cost Highway hotel
  • Shuttle from airport available
From$64
Average 3.5 /5 Guest Reviews Call BookMore Details
Baymont by Wyndham La Crosse/Onalaska
+1-888-965-8297
3300 Kinney Coulee Rd. North, Onalaska, WI 54650 ~44.54 miles north of Waukon
  • Economical Highway hotel
  • Hotel has a green policy See more
From$60
Average 3.0 /5 Reviews Call BookMore Details

Next: See My Waukon Hotels with Pricing

Bar Chart: Upcoming 20 Days of Waukon Hotel Rates

Rates shown are nightly rates before taxes and do not necessarily reflect all Waukon, IA discounts available. The chart reflects the cheapest Waukon hotel for each day and each star rating category.

FAQs about hotels in Waukon

What are the most favored hotels in Waukon?

Hampton Inn & Suites La Crosse Downtown, Best Western Plus LaCrescent and Home2 Suites by Hilton La Crosse are the best rated hotels based on customer reviews in the last 365 days.

What are the 4-5 star hotels in Waukon?

The Charmant Hotel, Stoney Creek Hotel La Crosse Onalaska and Boarders Inn & Suites by Cobblestone Hotels Waukon are the top 3 luxury hotels near Waukon city center.

What hotels are closest to the city center of Waukon?

Boarders Inn & Suites by Cobblestone Hotels Waukon, Super 8 by Wyndham Decorah, and Quality Inn & Suites Decorah are the properties closest to Waukon city center.

What are the most popular independent hotels in Waukon?

Boarders Inn & Suites by Cobblestone Hotels Waukon, Hotel Winneshiek and Boarders Inn & Suites by Cobblestone Hotels - Fayette are the best rated independent hotels (not part of a big brand).

What are the most popular Marriott hotels in Waukon?

Courtyard by Marriott La Crosse and Fairfield Inn & Suites by Marriott La Crosse Downtown are the best rated Marriott/Starwood branded hotels (based on customer reviews score).

What are the most popular Choice Hotels branded hotels in Waukon?

Quality Inn & Suites Decorah, Comfort Inn Onalaska La Crosse and Quality Inn & Suites are the best rated Choice Hotels branded hotels (based on HotelPlanner reviews score).

What are the best IHG hotels in Waukon?

Candlewood Suites La Crosse An Ihg Hotel and Holiday Inn Express & Suites Onalaska La Crosse are the best rated Intercontinental Hotel Group (IHG) branded hotels (based on user reviews score).

Recent traveler reviews of Waukon, IA

Below are reviews of the city of Waukon, IA from an actual visitor's perspective.

"Town is friendly"
Score 5.0 / 5

Gail L., from 10-Oct-2025
"It Is A Very Nice Small Town"
Score 5.0 / 5

I went here for a wedding and was very impressed. I like going to small towns and meeting the locals. I will be back again for sure.

Theresa F., from 26-Aug-2025
"Nice Quiet Town"
Score 5.0 / 5

Nice quiet town

Dan A., from 19-Aug-2025
"Lovely town with beautiful scenery!"
Score 4.0 / 5

Warm people, lovely active town with beautiful scenery.

Darla T., from 24-Jul-2024
The average traveler rating of the city of Waukon, IA shown above is 4.8 out of 5 based on 4 reviews
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