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Waukon Iowa Accommodations

Find the perfect hotel in Waukon using our hotel guide provided below. Explore our guide for inexpensive and discount hotel/motel rates in or near Waukon, IA for your business or personal leisure travel. We provide the best Waukon Iowa hotel/motel rooms. Review the Waukon hotel list below to find the perfect lodging. We also have a map of the Waukon hotels.

The Waukon center point is around 16 miles east of Luther College and 21 miles northwest of Villa Louis Historic Site.

Waukon Hotels & Accommodations

Boarders Inn & Suites by Cobblestone Hotels Waukon - Waukon 407 Rossville Rd., Waukon, IA 52172
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  • 3-star property
  • Comp. Breakfast
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From$80
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
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Super 8 by Wyndham Decorah in Decorah 810 Highway 9 East, Decorah, IA 52101
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~14.98 miles west of Waukon
  • Cheap Downtown property
  • 60 rooms in hotel
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From$69
Average 3.5 /5 Latest Reviews Call BookMore Details
Quality Inn & Suites Decorah in Decorah 705 Commerce Dr., Decorah, IA 52101
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~15.17 miles west of Waukon
  • Two-star Downtown property
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From$100
Very Good 4.0 /5 Guest Reviews Call BookMore Details
Hotel Winneshiek 104 East Water St., Decorah, IA 52101
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~15.81 miles west of Waukon
  • Three Star Downtown property
  • 2 meeting rooms in property
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From$129
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Country Inn & Suites by Radisson, Decorah, IA : 2042 State Highway 9 2042 State Highway 9, Decorah, IA 52101
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~16.49 miles west of Waukon
  • Affordable Rural hotel
  • Hotel has 70 rooms
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From$85
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Comfort Inn & Suites Marquette Prairie Du Chien in Marquette 100 North St., Marquette, IA 52158
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~21.52 miles southeast of Waukon
  • Midscale Riverfront hotel
  • Check-in: 3:00pm
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From$95
Average 3.0 /5 Guest Reviews Call BookMore Details
Country Inn & Suites by Radisson, Prairie du Chien 1801 Cabela South Ln, Prairie Du Chien, WI 53821
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~21.62 miles southeast of Waukon
  • 3 star Rural hotel
  • 64 rooms in property
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From$84
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Motel 6 Prairie Du Chien, WI : 533 North Marquette Rd. 533 North Marquette Rd., Prairie Du Chien, WI 53821
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~22.23 miles southeast of Waukon
  • Low-priced Riverfront property
  • Hotel has an eco-friendly policy Learn more
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From$42
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Microtel Inn & Suites by Wyndham Prairie Du Chien - Prairie Du Chien 1833 South Marquette Rd., Prairie Du Chien, WI 53821
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~23.93 miles southeast of Waukon
  • 2-star Downtown property
  • Check-in time: 3:00 PM
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From$60
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Super 8 by Wyndham Prairie Du Chien : 1930 South Marquette Rd. 1930 South Marquette Rd., Prairie Du Chien, WI 53821
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~24.15 miles southeast of Waukon
  • Two-star hotel
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From$60
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Quality Inn & Suites 37268 Us 18, Prairie Du Chien, WI 53821
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~24.40 miles southeast of Waukon
  • Midscale hotel
  • Fitness + Health Center
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From$55
Average 3.5 /5 Reviews Call BookMore Details
Big River Inn Hotel - Genoa 501 Water St., Genoa, WI 54632
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~24.48 miles northeast of Waukon
  • Cheap Riverfront hotel
  • Hotel has 5 suites
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From$31
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Americinn by Wyndham Prairie Du Chien in Prairie Du Chien 37502 Us Highway 18, Prairie Du Chien, WI 53821
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~24.60 miles southeast of Waukon
  • 2 star property
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From$60
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Super 8 by Wyndham Cresco Ia - Cresco 511 2nd Ave. Se, Cresco, IA 52136
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~32.63 miles west of Waukon
  • Low Cost Rural property
  • Has environment-friendly policy Learn more
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From$79
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Boarders Inn & Suites by Cobblestone Hotels - Fayette : 515 Half West Water St. 515 Half West Water St., Fayette, IA 52142
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~35.18 miles southwest of Waukon
  • Mid-scale Rural hotel
  • Hotel has 2 floors
More Photos Exterior of Boarders Inn & Suites by Cobblestone Hotels - Fayette
From$90
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
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Norwood Inn La Crosse in La Crosse 101 Sky Harbour Dr., La Crosse, WI 54603
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~38.51 miles north of Waukon
  • 3 star Airport hotel
  • Check-in: 3:00 p.m.
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From$55
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Courtyard by Marriott La Crosse 500 Front St. South, La Crosse, WI 54601
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~38.79 miles north of Waukon
  • Affordable Downtown hotel
  • Gym / Fitness Center Available
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From$144
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Fairfield Inn & Suites by Marriott La Crosse Downtown 434 3rd St. South, La Crosse, WI 54601
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~38.82 miles north of Waukon
  • 3 star Downtown hotel
  • 20 suites in property
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From$80
Very Good 4.0 /5 Reviews Call BookMore Details
Home2 Suites by Hilton La Crosse 210 Jay St., La Crosse, WI 54601
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~38.89 miles north of Waukon
  • Three Star Downtown property
  • Hotel has a green policy Read more
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From$89
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Holiday Inn Hotel & Suites La Crosse, an IHG Hotel - La Crosse 200 Pearl St., La Crosse, WI 54601
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~39.02 miles north of Waukon
  • Mid-scale Downtown property
  • 5 floors in hotel
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From$89
Very Good 4.0 /5 Review Score Call BookMore Details
Radisson Hotel La Crosse : 200 Harborview Plaza 200 Harborview Plaza, La Crosse, WI 54601 Website
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~39.07 miles north of Waukon
  • 3 star Downtown hotel
  • 8 floors in hotel
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From$80
Average 3.0 /5 Hotel Reviews Call BookMore Details
Gundersen Hotel & Suites in La Crosse 1520 Clinic Court, La Crosse, WI 54601
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~39.11 miles north of Waukon
  • Cheap hotel
  • Free comp. breakfast
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From$99
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The Charmant Hotel 101 State St., La Crosse, WI 54601
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~39.18 miles north of Waukon
  • Expensive Riverfront hotel
  • Check-in time: 3:00PM
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From$149
Very Good 4.0 /5 Reviews Call BookMore Details
Hampton Inn & Suites La Crosse Downtown 511 3rd St. North, La Crosse, WI 54601
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~39.36 miles north of Waukon
  • Midscale Downtown hotel
  • Check in time: 3:00 PM
More Photos Photo of Hampton Inn & Suites La Crosse Downtown
From$105
Excellent 5.0 /5 Read Reviews Call BookMore Details
Grandstay Hotel & Suites 525 Front St. North, La Crosse, WI 54601
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~39.42 miles north of Waukon
  • Midscale Downtown hotel
  • Hotel has 55 suites
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From$85
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Americinn by Wyndham Boscobel - Boscobel 1700 Elm St., Boscobel, WI 53805
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~39.73 miles east of Waukon
  • Three Star Convention Center property
  • Hotel has an eco-friendly policy Learn more
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From$75
Very Good 4.0 /5 Reviews Call BookMore Details
Old Towne Motel in Westby 102 East Old Town Rd., Westby, WI 54667
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~39.81 miles northeast of Waukon
  • Economy property
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From$60
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Candlewood Suites La Crosse An Ihg Hotel 56 Copeland Ave., La Crosse, WI 54603
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~39.85 miles north of Waukon
  • 2 star Downtown hotel
  • Hotel has an eco-friendly policy See policy
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From$60
Very Good 4.0 /5 Review Score Call BookMore Details
Best Western Plus LaCrescent / LaCrosse in La Crescent 509 North Chestnut St., La Crescent, MN 55947
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~39.94 miles north of Waukon
  • 3-star Highway property
  • 61 rooms in hotel
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From$66
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Super 8 by Wyndham La Crosse : 1625 Rose St. 1625 Rose St., La Crosse, WI 54603
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~41.39 miles north of Waukon
  • Economy Highway hotel
  • 2 floors in hotel
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From$50
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Americinn by Wyndham La Crosse Riverfront Conference Center : 1835 Rose St. 1835 Rose St., La Crosse, WI 54669
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~41.59 miles north of Waukon
  • 2-star Riverfront property
  • Free comp. breakfast
More Photos Exterior of Americinn by Wyndham La Crosse Riverfront Conference Center
From$99
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Quality Inn La Crosse North : 1830 Rose St. 1830 Rose St., La Crosse, WI 54603 Website
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~41.61 miles north of Waukon
  • Three Star Convention Center property
  • Complimentary breakfast is offered
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From$72
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Econo Lodge La Crosse North 1906 Rose St., La Crosse, WI 54603
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~41.63 miles north of Waukon
  • Two-star Convention Center property
  • Free complimentary breakfast
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From$55
Average 3.0 /5 Review Score Call BookMore Details
Country Inn & Suites by Radisson, La Crosse, WI - La Crosse 2110 Rose St., La Crosse, WI 54603
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~41.86 miles north of Waukon
  • 3-star Highway hotel
  • Check in time: 3:00 PM
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From$79
Very Good 4.0 /5 Read Reviews Call BookMore Details
Days Inn by Wyndham La Crosse 2150 Rose St., La Crosse, WI 54603
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~41.91 miles north of Waukon
  • 2 star Riverfront property
  • Check in time: 3:00 PM
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From$60
Average 3.5 /5 Recent Reviews Call BookMore Details
Blue Way Inn & Suites La Crosse in La Crosse 101 Building 1 Sky Harbour Dr., La Crosse, WI 54603
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~42.07 miles north of Waukon
  • Two star property
  • Free breakfast available
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From$50
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Americas Best Value Inn La Crosse 2622 Rose St., La Crosse, WI 54603
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~42.34 miles north of Waukon
  • 2 star Highway hotel
  • 110 rooms in property
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From$44
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Coratel Inn & Suites by Jasper La Crosse in La Crosse Building 2 101, La Crosse, WI 54603
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~42.53 miles north of Waukon
  • Economy property
  • Comp. Breakfast
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From$50
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Comfort Inn Onalaska La Crosse - Onalaska 1223 Crossing Meadows Dr., Onalaska, WI 54650 Website
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~43.49 miles north of Waukon
  • Three Star Highway hotel
  • Has environment-friendly policy Read more
More Photos Image of Comfort Inn Onalaska La Crosse
From$80
Very Good 4.0 /5 Guest Reviews Call BookMore Details
Days Inn & Suites by Wyndham Onalaska / La Crosse in Onalaska 9409 Wi 16, Onalaska, WI 54650
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~43.85 miles north of Waukon
  • Three Star Suburban hotel
  • Fitness center on property
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From$109
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Stoney Creek Hotel La Crosse - Onalaska - Onalaska 3060 South Kinney Coulee Rd., Onalaska, WI 54650
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~44.10 miles north of Waukon
  • Cheap Airport property
  • Free breakfast available
More Photos Photo of Stoney Creek Hotel La Crosse - Onalaska
From$60
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Stoney Creek Hotel La Crosse Onalaska - Onalaska 1306 South Kinney Coulee Rd., Onalaska, WI 54650
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~44.20 miles north of Waukon
  • 4-star Airport hotel
  • 8 meeting rooms in property
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From$125
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Holiday Inn Express & Suites Onalaska La Crosse : 2614 Midwest Dr. 2614 Midwest Dr., Onalaska, WI 54650
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~44.26 miles north of Waukon
  • Midscale hotel
  • Hotel has 136 rooms
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From$80
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Hampton Inn Lacrosse/Onalaska - Onalaska 308 Hampton Court, Onalaska, WI 54650
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~44.31 miles north of Waukon
  • Affordable Highway hotel
  • Free comp. breakfast
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From$80
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Microtel Inn by Wyndham Onalaska/La Crosse in Onalaska 3240 North Kinney Coulee Rd., Onalaska, WI 54650
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~44.46 miles north of Waukon
  • Cheap Suburban property
  • Free breakfast available
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From$60
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Baymont by Wyndham La Crosse / Onalaska - Onalaska 3300 North Kinney Coulee Rd., Onalaska, WI 54650
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~44.50 miles north of Waukon
  • Low Cost Highway property
  • Hotel has an eco-friendly policy See more
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From$64
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Baymont by Wyndham La Crosse/Onalaska - Onalaska 3300 Kinney Coulee Rd. North, Onalaska, WI 54650
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~44.54 miles north of Waukon
  • Economical Highway hotel
  • Access to gym on-site
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From$60
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Next: See My Waukon Hotels with Pricing

Bar Chart: Upcoming 20 Days of Waukon Hotel Rates

Rates shown are nightly rates before taxes and do not necessarily reflect all Waukon, IA discounts available. The chart reflects the cheapest Waukon hotel for each day and each star rating category.

FAQs about hotels in Waukon

What are the most favored hotels in Waukon?

Hampton Inn & Suites La Crosse Downtown, Best Western Plus LaCrescent and Home2 Suites by Hilton La Crosse are the best rated hotels based on customer reviews in the last 365 days.

What are the 4-5 star hotels in Waukon?

The Charmant Hotel, Stoney Creek Hotel La Crosse Onalaska and Boarders Inn & Suites by Cobblestone Hotels Waukon are the top 3 luxury hotels near Waukon city center.

What hotels are closest to the city center of Waukon?

Boarders Inn & Suites by Cobblestone Hotels Waukon, Super 8 by Wyndham Decorah, and Quality Inn & Suites Decorah are the properties closest to Waukon city center.

What are the most popular independent hotels in Waukon?

Boarders Inn & Suites by Cobblestone Hotels Waukon, Hotel Winneshiek and Boarders Inn & Suites by Cobblestone Hotels - Fayette are the best rated independent hotels (not part of a big brand).

What are the most popular Marriott hotels in Waukon?

Courtyard by Marriott La Crosse and Fairfield Inn & Suites by Marriott La Crosse Downtown are the best rated Marriott/Starwood branded hotels (based on customer reviews score).

What are the most popular Choice Hotels branded hotels in Waukon?

Quality Inn & Suites Decorah, Comfort Inn Onalaska La Crosse and Quality Inn & Suites are the best rated Choice Hotels branded hotels (based on HotelPlanner reviews score).

What are the best IHG hotels in Waukon?

Candlewood Suites La Crosse An Ihg Hotel and Holiday Inn Express & Suites Onalaska La Crosse are the best rated Intercontinental Hotel Group (IHG) branded hotels (based on user reviews score).

Recent traveler reviews of Waukon, IA

Below are reviews of the city of Waukon, IA from an actual visitor's perspective.

"Town is friendly"
Score 5.0 / 5

Gail L., from 10-Oct-2025
"It Is A Very Nice Small Town"
Score 5.0 / 5

I went here for a wedding and was very impressed. I like going to small towns and meeting the locals. I will be back again for sure.

Theresa F., from 26-Aug-2025
"Nice Quiet Town"
Score 5.0 / 5

Nice quiet town

Dan A., from 19-Aug-2025
"Lovely town with beautiful scenery!"
Score 4.0 / 5

Warm people, lovely active town with beautiful scenery.

Darla T., from 24-Jul-2024
The average traveler rating of the city of Waukon, IA shown above is 4.8 out of 5 based on 4 reviews
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