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Waukon Iowa Accommodations

Find the perfect hotel in Waukon using our hotel guide provided below. Explore our guide for inexpensive and discount hotel/motel rates in or near Waukon, IA for your business or personal leisure travel. We provide the best Waukon Iowa hotel/motel rooms. Review the Waukon hotel list below to find the perfect lodging. We also have a map of the Waukon hotels.

The Waukon center point is around 16 miles east of Luther College and 21 miles northwest of Villa Louis Historic Site.

Waukon Hotels/Motels & Accommodations

Boarders Inn & Suites by Cobblestone Hotels Waukon : 407 Rossville Rd. 407 Rossville Rd., Waukon, IA 52172
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  • Affordable property
  • 38 sleeping rooms in hotel
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From$80
Very Good 4.0 /5 Guest Reviews Call BookMore Details
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Super 8 by Wyndham Decorah - Decorah 810 Highway 9 East, Decorah, IA 52101
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~14.98 miles west of Waukon
  • Two star Downtown property
  • Fitness center on property
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From$69
Average 3.5 /5 Hotel Reviews Call BookMore Details
Quality Inn & Suites Decorah : 705 Commerce Dr. 705 Commerce Dr., Decorah, IA 52101
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~15.17 miles west of Waukon
  • 2-star Downtown property
  • Comp. Breakfast
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From$100
Very Good 4.0 /5 Reviews Call BookMore Details
Hotel Winneshiek in Decorah 104 East Water St., Decorah, IA 52101
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~15.81 miles west of Waukon
  • Mid-scale Downtown hotel
  • Check in: 3:00 PM
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From$129
Very Good 4.0 /5 Review Score Call BookMore Details
Country Inn & Suites by Radisson, Decorah, IA - Decorah 2042 State Highway 9, Decorah, IA 52101
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~16.49 miles west of Waukon
  • Affordable Rural property
  • 15 suites in property
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From$85
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Comfort Inn & Suites Marquette Prairie Du Chien 100 North St., Marquette, IA 52158 Website
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~21.52 miles southeast of Waukon
  • Affordable Riverfront property
  • Check-in time: 3:00pm
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From$95
Average 3.0 /5 Read Reviews Call BookMore Details
Country Inn & Suites by Radisson, Prairie du Chien - Prairie Du Chien 1801 Cabela South Ln, Prairie Du Chien, WI 53821
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~21.62 miles southeast of Waukon
  • Three Star Rural property
  • 23 suites in hotel
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From$84
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Motel 6 Prairie Du Chien, WI 533 North Marquette Rd., Prairie Du Chien, WI 53821
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~22.23 miles southeast of Waukon
  • Cheap Riverfront property
  • Hotel has 2 floors
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From$42
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Microtel Inn & Suites by Wyndham Prairie Du Chien : 1833 South Marquette Rd. 1833 South Marquette Rd., Prairie Du Chien, WI 53821
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~23.93 miles southeast of Waukon
  • Economy Downtown property
  • Complimentary breakfast is offered
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From$60
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Super 8 by Wyndham Prairie Du Chien 1930 South Marquette Rd., Prairie Du Chien, WI 53821
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~24.15 miles southeast of Waukon
  • Two-star hotel
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From$60
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Quality Inn & Suites - Prairie Du Chien 37268 Us 18, Prairie Du Chien, WI 53821
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~24.40 miles southeast of Waukon
  • Mid-scale hotel
  • 16 suites in hotel
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From$55
Average 3.5 /5 Guest Reviews Call BookMore Details
Big River Inn Hotel - Genoa 501 Water St., Genoa, WI 54632
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~24.48 miles northeast of Waukon
  • Low priced Riverfront hotel
  • 2 floors in property
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From$31
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Americinn by Wyndham Prairie Du Chien 37502 Us Highway 18, Prairie Du Chien, WI 53821
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~24.60 miles southeast of Waukon
  • Two-star property
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From$60
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Super 8 by Wyndham Cresco Ia 511 2nd Ave. Se, Cresco, IA 52136
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~32.63 miles west of Waukon
  • 2-star Rural hotel
  • Free complimentary breakfast
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From$79
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Boarders Inn & Suites by Cobblestone Hotels - Fayette 515 Half West Water St., Fayette, IA 52142
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~35.18 miles southwest of Waukon
  • Midscale Rural property
  • Check in: 15:00
More Photos Photo of Boarders Inn & Suites by Cobblestone Hotels - Fayette
From$90
Very Good 4.0 /5 Latest Reviews Call BookMore Details
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Norwood Inn La Crosse - La Crosse 101 Sky Harbour Dr., La Crosse, WI 54603
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~38.51 miles north of Waukon
  • 3 star Airport hotel
  • 7 meeting rooms in property
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From$55
Average 3.0 /5 Review Score Call BookMore Details
Courtyard by Marriott La Crosse in La Crosse 500 Front St. South, La Crosse, WI 54601
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~38.79 miles north of Waukon
  • 3 star Downtown property
  • Hotel has 78 rooms
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From$144
Very Good 4.0 /5 Guest Reviews Call BookMore Details
Fairfield Inn & Suites by Marriott La Crosse Downtown - La Crosse 434 3rd St. South, La Crosse, WI 54601
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~38.82 miles north of Waukon
  • Midscale Downtown hotel
  • 4 floors in hotel
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From$80
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Home2 Suites by Hilton La Crosse 210 Jay St., La Crosse, WI 54601
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~38.89 miles north of Waukon
  • Three Star Downtown property
  • Fitness + Health Center
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From$89
Very Good 4.5 /5 Reviews Call BookMore Details
Holiday Inn Hotel & Suites La Crosse, an IHG Hotel : 200 Pearl St. 200 Pearl St., La Crosse, WI 54601
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~39.02 miles north of Waukon
  • 3 star Downtown hotel
  • 5 floors in hotel
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From$89
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Radisson Hotel La Crosse in La Crosse 200 Harborview Plaza, La Crosse, WI 54601 Website
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~39.07 miles north of Waukon
  • Affordable Downtown hotel
  • Check-in time: 3:00 PM
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From$80
Average 3.0 /5 Review Score Call BookMore Details
Gundersen Hotel & Suites - La Crosse 1520 Clinic Court, La Crosse, WI 54601
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~39.11 miles north of Waukon
  • Low-priced property
  • Free complimentary breakfast
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From$99
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The Charmant Hotel in La Crosse 101 State St., La Crosse, WI 54601
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~39.18 miles north of Waukon
  • 4 star Riverfront hotel
  • Fitness + Health Center
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From$149
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Hampton Inn & Suites La Crosse Downtown 511 3rd St. North, La Crosse, WI 54601
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~39.36 miles north of Waukon
  • Mid-scale Downtown property
  • 5 floors in hotel
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From$105
Excellent 5.0 /5 Hotel Reviews Call BookMore Details
Grandstay Hotel & Suites : 525 Front St. North 525 Front St. North, La Crosse, WI 54601
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~39.42 miles north of Waukon
  • Affordable Downtown property
  • Complimentary breakfast is offered
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From$85
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Americinn by Wyndham Boscobel in Boscobel 1700 Elm St., Boscobel, WI 53805
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~39.73 miles east of Waukon
  • 3-star Convention Center property
  • Check-in: 3:00 PM
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From$75
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Old Towne Motel - Westby 102 East Old Town Rd., Westby, WI 54667
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~39.81 miles northeast of Waukon
  • Economy hotel
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From$60
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Candlewood Suites La Crosse An Ihg Hotel 56 Copeland Ave., La Crosse, WI 54603
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~39.85 miles north of Waukon
  • Economy Downtown property
  • Check-in: 3:00PM
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From$60
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Best Western Plus LaCrescent / LaCrosse 509 North Chestnut St., La Crescent, MN 55947
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~39.94 miles north of Waukon
  • Midscale Highway property
  • 61 rooms in hotel
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From$66
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Super 8 by Wyndham La Crosse 1625 Rose St., La Crosse, WI 54603
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~41.39 miles north of Waukon
  • Two-star Highway hotel
  • 2 floors in hotel
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From$50
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Americinn by Wyndham La Crosse Riverfront Conference Center 1835 Rose St., La Crosse, WI 54669
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~41.59 miles north of Waukon
  • Cheap Riverfront property
  • 2 floors in property
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From$99
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Quality Inn La Crosse North : 1830 Rose St. 1830 Rose St., La Crosse, WI 54603 Website
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~41.61 miles north of Waukon
  • Midscale Convention Center hotel
  • 84 rooms in property
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From$72
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Econo Lodge La Crosse North : 1906 Rose St. 1906 Rose St., La Crosse, WI 54603
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~41.63 miles north of Waukon
  • Cheap Convention Center property
  • Free comp. breakfast
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From$55
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Country Inn & Suites by Radisson, La Crosse, WI : 2110 Rose St. 2110 Rose St., La Crosse, WI 54603
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~41.86 miles north of Waukon
  • Mid-scale Highway property
  • Fitness + Health Center
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From$79
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Motel 6 La Crosse, WI in La Crosse 2150 Rose St., La Crosse, WI 54603
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~41.91 miles north of Waukon
  • 2 star Riverfront hotel
  • Complimentary breakfast is offered
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From$60
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Blue Way Inn & Suites La Crosse : 101 Building 1 Sky Harbour Dr. 101 Building 1 Sky Harbour Dr., La Crosse, WI 54603
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~42.07 miles north of Waukon
  • Inexpensive property
  • 20 sleeping rooms in hotel
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From$50
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Americas Best Value Inn La Crosse - La Crosse 2622 Rose St., La Crosse, WI 54603
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~42.34 miles north of Waukon
  • Cheap Highway property
  • 110 rooms in hotel
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From$44
Poor 2.0 /5 Review Score Call BookMore Details
Coratel Inn & Suites by Jasper La Crosse : Building 2 101 Building 2 101, La Crosse, WI 54603
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~42.53 miles north of Waukon
  • Two star hotel
  • Check in time: 3:00 PM
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From$50
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Comfort Inn Onalaska La Crosse : 1223 Crossing Meadows Dr. 1223 Crossing Meadows Dr., Onalaska, WI 54650 Website
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~43.49 miles north of Waukon
  • 3-star Highway property
  • 2 floors in hotel
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From$80
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Days Inn & Suites by Wyndham Onalaska / La Crosse 9409 Wi 16, Onalaska, WI 54650
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~43.85 miles north of Waukon
  • Affordable Suburban hotel
  • Hotel has 75 rooms
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From$109
Very Good 4.0 /5 Review Score Call BookMore Details
Stoney Creek Hotel & Conference Center - Onalaska 3060 South Kinney Coulee Rd., Onalaska, WI 54650
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~44.10 miles north of Waukon
  • Economy Airport property
  • Check in: 3:00 PM
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From$60
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Stoney Creek Hotel La Crosse Onalaska : 1306 South Kinney Coulee Rd. 1306 South Kinney Coulee Rd., Onalaska, WI 54650
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~44.20 miles north of Waukon
  • High end Airport hotel
  • Shuttle from airport available
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From$125
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Holiday Inn Express & Suites Onalaska La Crosse 2614 Midwest Dr., Onalaska, WI 54650
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~44.26 miles north of Waukon
  • Midscale property
  • Check-in: 3:00PM
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From$80
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Hampton Inn Lacrosse/Onalaska 308 Hampton Court, Onalaska, WI 54650
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~44.31 miles north of Waukon
  • Mid-scale Highway property
  • Hotel has 3 floors
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From$80
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Microtel Inn by Wyndham Onalaska/La Crosse 3240 North Kinney Coulee Rd., Onalaska, WI 54650
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~44.46 miles north of Waukon
  • Low-priced Suburban property
  • Comp. Breakfast
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From$60
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Baymont by Wyndham La Crosse / Onalaska in Onalaska 3300 North Kinney Coulee Rd., Onalaska, WI 54650
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~44.50 miles north of Waukon
  • Low priced Highway property
  • Complimentary breakfast is offered
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From$64
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Baymont by Wyndham La Crosse/Onalaska : 3300 Kinney Coulee Rd. North 3300 Kinney Coulee Rd. North, Onalaska, WI 54650
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~44.54 miles north of Waukon
  • 2-star Highway property
  • Has environment-friendly policy Read more
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From$60
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Next: See My Waukon Hotels with Pricing

Bar Chart: Upcoming 20 Days of Waukon Hotel Rates

Rates shown are nightly rates before taxes and do not necessarily reflect all Waukon, IA discounts available. The chart reflects the cheapest Waukon hotel for each day and each star rating category.

FAQs about hotels in Waukon

What are the most favored hotels in Waukon?

Hampton Inn & Suites La Crosse Downtown, Best Western Plus LaCrescent and Home2 Suites by Hilton La Crosse are the best rated hotels based on customer reviews in the last 365 days.

What are the 4-5 star hotels in Waukon?

The Charmant Hotel, Stoney Creek Hotel La Crosse Onalaska and Boarders Inn & Suites by Cobblestone Hotels Waukon are the top 3 luxury hotels near Waukon city center.

What hotels are closest to the city center of Waukon?

Boarders Inn & Suites by Cobblestone Hotels Waukon, Super 8 by Wyndham Decorah, and Quality Inn & Suites Decorah are the properties closest to Waukon city center.

What are the most popular independent hotels in Waukon?

Boarders Inn & Suites by Cobblestone Hotels Waukon, Hotel Winneshiek and Boarders Inn & Suites by Cobblestone Hotels - Fayette are the best rated independent hotels (not part of a big brand).

What are the most popular Marriott hotels in Waukon?

Courtyard by Marriott La Crosse and Fairfield Inn & Suites by Marriott La Crosse Downtown are the best rated Marriott/Starwood branded hotels (based on customer reviews score).

What are the most popular Choice Hotels branded hotels in Waukon?

Quality Inn & Suites Decorah, Comfort Inn Onalaska La Crosse and Quality Inn & Suites are the best rated Choice Hotels branded hotels (based on HotelPlanner reviews score).

What are the best IHG hotels in Waukon?

Candlewood Suites La Crosse An Ihg Hotel and Holiday Inn Express & Suites Onalaska La Crosse are the best rated Intercontinental Hotel Group (IHG) branded hotels (based on user reviews score).

Recent traveler reviews of Waukon, IA

Below are reviews of the city of Waukon, IA from an actual visitor's perspective.

"Town is friendly"
Score 5.0 / 5

Gail L., from 10-Oct-2025
"It Is A Very Nice Small Town"
Score 5.0 / 5

I went here for a wedding and was very impressed. I like going to small towns and meeting the locals. I will be back again for sure.

Theresa F., from 26-Aug-2025
"Nice Quiet Town"
Score 5.0 / 5

Nice quiet town

Dan A., from 19-Aug-2025
"Lovely town with beautiful scenery!"
Score 4.0 / 5

Warm people, lovely active town with beautiful scenery.

Darla T., from 24-Jul-2024
The average traveler rating of the city of Waukon, IA shown above is 4.8 out of 5 based on 4 reviews
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