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Shelter Island California Hotels & Motels

Find hotels & motels in Shelter Island using the list below. Find cheap and/or discounted hotel rates in or near Shelter Island, CA for your business or personal leisure travel. Discover the best Shelter Island, California motel and hotel rooms. Browse the Shelter Island area hotels to find the perfect lodging! Please use the provided map of the Shelter Island hotels. Need 5+ Rooms? Secure Shelter Island Group Hotel Deals

The Shelter Island center is around the area of Roseville and the area of Liberty Station.

Shelter Island Hotels/Motels & Accommodations

Sunrise Inn San Diego - San Diego
+1-888-389-4121
1150 Rosecrans St., San Diego, CA 92106 ~0.33 miles east of Shelter Island
  • Two-star Airport hotel
  • Hotel has 18 rooms
From$40
Average 3.5 /5 Read Reviews Call BookMore Details
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The Pearl Hotel
+1-888-675-2083
1410 Rosecrans St., San Diego, CA 92106 ~0.45 miles east of Shelter Island
  • 3-star Airport property
  • 23 rooms in property
From$71
Very Good 4.0 /5 Reviews Call BookMore Details
Hotel Point Loma
+1-800-716-8490
2933 Fenelon St., San Diego, CA 92106 ~0.46 miles east of Shelter Island
  • Two star Beach property
  • Check in: 3:00PM
Ramada San Diego Airport
+1-800-805-5223
1403 Rosecrans St., San Diego, CA 92106 ~0.48 miles east of Shelter Island
  • 2 star Airport property
  • Hotel has 80 rooms
From$69
Average 3.0 /5 Review Score Call BookMore Details
Sea Harbor Hotel
+1-888-965-1860
1325 Scott St., San Diego, CA 92106 ~0.49 miles east of Shelter Island
  • Low priced Airport property
  • 40 sleeping rooms in hotel
From$60
Very Good 4.0 /5 Guest Reviews Call BookMore Details
Hotel Aqua Mar
+1-888-788-5576
1510 Rosecran St., San Diego, CA 92106 ~0.52 miles east of Shelter Island
  • Cheap Beach hotel
  • Hotel has 16 rooms
Comfort Inn San Diego at the Harbor - San Diego
+1-888-897-9207
5102 North Harbor Dr., San Diego, CA 92106 Website ~0.53 miles east of Shelter Island
  • Cheap Airport hotel
  • 46 rooms in hotel
From$94
Very Good 4.0 /5 Guest Reviews Call BookMore Details
The Monsaraz San Diego Tapestry Collection by Hilton
+1-888-311-4278
1451 Rosecrans St., San Diego, CA 92106 ~0.53 miles east of Shelter Island
  • Mid-scale Riverfront property
  • Hotel has 3 floors
From$150
Very Good 4.0 /5 Review Score Call BookMore Details
The Monsaraz Tapestry by Hilton - San Diego
+1-888-469-4795
2912 Garrison St., San Diego, CA 92106 ~0.54 miles east of Shelter Island
  • 3-star hotel
  • Fitness + Health Center
From$90
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Best Western Yacht Harbor Hotel
+1-888-734-9421
5005 North Harbor Dr., San Diego, CA 92106 ~0.65 miles east of Shelter Island
  • 3-star Airport hotel
  • Airport shuttle provided
From$85
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Consulate Hotel Airport/Sea World San Diego Area in San Diego
+1-888-841-5292
2901 Nimitz Blvd., San Diego, CA 92106 ~0.70 miles east of Shelter Island
  • 2-star Airport property
  • Hotel has 110 rooms
From$40
Average 3.0 /5 Read Reviews Call BookMore Details
Holiday Inn San Diego-Bayside, an IHG Hotel in San Diego
+1-888-455-5160
4875 North Harbor Dr., San Diego, CA 92106 ~0.78 miles east of Shelter Island
  • 3-star Airport hotel
  • 292 rooms in property
From$149
Very Good 4.0 /5 Review Score Call BookMore Details
Humphreys Half Moon Inn - San Diego
+1-888-965-8297
2303 Shelter Island Dr., San Diego, CA 92106 ~0.81 miles southeast of Shelter Island
  • 3-star Suburban property
  • Hotel has an eco-friendly policy See more
From$199
Average 3.0 /5 Reviews Call BookMore Details
The Bay Club Hotel & Marina in San Diego
+1-888-906-6358
2131 Shelter Island Dr., San Diego, CA 92106 ~0.86 miles southeast of Shelter Island
  • Three Star Resort hotel
  • Check in: 4:00 pm
From$119
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Best Western Plus Island Palms Hotel & Marina
+1-888-749-6785
2051 Shelter Island Dr., San Diego, CA 92106 ~0.93 miles southeast of Shelter Island
  • Inexpensive Beach hotel
  • 227 rooms in hotel
From$54
Very Good 4.0 /5 Recent Reviews Call BookMore Details
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Kona Kai Resort & Spa, A Noble House Resort - San Diego
+1-888-878-9982
1551 Shelter Island Dr., San Diego, CA 92106 ~1.01 miles south of Shelter Island
  • Expensive Resort hotel
  • Check-in time: 4:00pm
From$149
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Homewood Suites by Hilton San Diego Airport/Liberty Station
+1-888-389-4485
2576 Laning Rd., San Diego, CA 92106 ~1.24 miles east of Shelter Island
  • Three Star Airport hotel
  • 4 floors in hotel
From$129
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Courtyard by Marriott San Diego Airport/Liberty Station - San Diego
+1-888-389-4121
2592 Laning Rd., San Diego, CA 92106 ~1.28 miles east of Shelter Island
  • Midscale Riverfront property
  • Hotel has 4 floors
From$145
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Towneplace Stes Arpt Marriott
+1-888-675-2083
2311 Lee Court, San Diego, CA 92101 ~1.49 miles east of Shelter Island
  • Mid-scale hotel
  • Check-in: 16:00
From$90
Excellent 5.0 /5 Review Score Call BookMore Details
 Hampton Inn & Suites San Diego Airport Liberty Station in San Diego
+1-800-716-8490
2211 Lee Court, San Diego, CA 92101 ~1.49 miles east of Shelter Island
  • Midscale Airport property
  • Complimentary breakfast is offered
From$99
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Hilton San Diego Airport/Harbor Island - San Diego
+1-800-805-5223
1960 Harbor Island Dr., San Diego, CA 92101 ~1.61 miles east of Shelter Island
  • Mid-scale Downtown hotel
  • Check-in time: 3:00
From$98
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Ocean Beach Hotel - San Diego
+1-888-965-1860
5080 Newport Ave., San Diego, CA 92107 ~1.85 miles northwest of Shelter Island
  • Low Cost Beach property
  • Check-in: 3:00pm
From$65
Very Good 4.0 /5 Reviews Call BookMore Details
Ocean Villa Inn in San Diego
+1-888-788-5576
5142 West Point Loma Blvd., San Diego, CA 92107 ~2.18 miles north of Shelter Island
  • 3-star property
  • Check in time: 15:00
From$90
Very Good 4.0 /5 Read Reviews Call BookMore Details
Americas Best Value Inn Loma Lodge
+1-888-897-9207
3202 Rosecrans St., San Diego, CA 92110 ~2.20 miles northeast of Shelter Island
  • Cheap Airport property
  • Complimentary breakfast is offered
From$48
Average 3.0 /5 Latest Reviews Call BookMore Details
Sheraton San Diego Hotel and Marina - San Diego
+1-888-311-4278
1380 Harbor Island Dr., San Diego, CA 92101 ~2.26 miles east of Shelter Island
  • 4 star Resort hotel
  • 1053 rooms in hotel
From$80
Very Good 4.0 /5 Read Reviews Call BookMore Details
Ramada by Wyndham near SeaWorld / Mission Beach : 3747 Midway Dr.
+1-888-469-4795
3747 Midway Dr., San Diego, CA 92110 ~2.27 miles northeast of Shelter Island
  • 3 star Suburban property
  • Free comp. breakfast
From$80
Average 3.0 /5 Hotel Reviews Call BookMore Details
Travelodge by Wyndham San Diego SeaWorld in San Diego
+1-888-734-9421
3275 Rosecrans St., San Diego, CA 92110 ~2.28 miles northeast of Shelter Island
  • Economical Beach hotel
  • Check in time: 2PM
Sunshine Suites at Midway
+1-888-841-5292
3889 Midway Dr., San Diego, CA 92110 ~2.31 miles northeast of Shelter Island
  • Mid-scale Beach hotel
  • 3 floors in property
From$115
Average 3.0 /5 Guest Reviews Call BookMore Details
Howard Johnson by Wyndham San Diego Sea World - San Diego
+1-888-455-5160
3330 Rosecrans St., San Diego, CA 92110 ~2.35 miles northeast of Shelter Island
  • 2 star Suburban property
  • Check in time: 3:00 PM
From$60
Average 3.5 /5 Reviews Call BookMore Details
Wyndham Garden San Diego Near Seaworld in San Diego
+1-888-965-8297
3737 Sports Arena Blvd., San Diego, CA 92110 ~2.38 miles northeast of Shelter Island
  • Affordable Airport property
  • 3 floors in hotel
From$80
Average 3.0 /5 Reviews Call BookMore Details
Holiday Inn Express San Diego - SeaWorld Area, an IHG Hotel
+1-888-906-6358
3950 Jupiter St., San Diego, CA 92110 ~2.39 miles north of Shelter Island
  • 3-star property
  • Gym / Fitness Center Available
From$119
Very Good 4.0 /5 Reviews Call BookMore Details
Heritage Inn San Diego
+1-888-749-6785
3333 Channel Way, San Diego, CA 92110 ~2.41 miles northeast of Shelter Island
  • Low Cost Beach property
  • Free breakfast available
Days Inn & Suites by Wyndham San Diego Near Sea World
+1-888-878-9982
3350 Rosecrans St., San Diego, CA 92110 ~2.41 miles northeast of Shelter Island
  • Economical Airport hotel
Motel 6 San Diego, CA – near Sea World : 3880 Greenwood St.
+1-888-389-4485
3880 Greenwood St., San Diego, CA 92110 ~2.78 miles northeast of Shelter Island
  • Two star Airport property
  • Check in time: 3:00 PM
From$72
Average 3.0 /5 Review Score Call BookMore Details
Four Points by Sheraton San Diego - SeaWorld in San Diego
+1-888-389-4121
3888 Green Wood St., San Diego, CA 92110 ~2.81 miles northeast of Shelter Island
  • Midscale Airport hotel
  • Hotel has 207 rooms
From$80
Average 3.5 /5 Reviews Call BookMore Details
Old Town Inn : 4444 Pacific Highway
+1-888-675-2083
4444 Pacific Highway, San Diego, CA 92110 ~2.82 miles northeast of Shelter Island
  • Low priced Suburban property
  • Comp. Breakfast
From$89
Very Good 4.0 /5 Guest Reviews Call BookMore Details
The Dana on Mission Bay
+1-800-716-8490
1710 West Mission Bay Dr., San Diego, CA 92109 ~2.86 miles north of Shelter Island
  • 4 star Beach hotel
  • Hotel has 13 meeting rooms
From$90
Very Good 4.0 /5 Read Reviews Call BookMore Details
Hyatt Regency Mission Bay Spa and Marina
+1-800-805-5223
1441 Quivira Rd., San Diego, CA 92109 ~2.87 miles north of Shelter Island
  • Four-star Beach property
  • 76 suites in hotel
From$289
Very Good 4.0 /5 Review Score Call BookMore Details
Comfort Inn San Diego Old Town - San Diego
+1-888-965-1860
2380 Moore St., San Diego, CA 92110 ~2.98 miles northeast of Shelter Island
  • Three Star Airport hotel
  • Check-in: 15:00
From$80
Very Good 4.0 /5 Read Reviews Call BookMore Details
Courtyard by Marriott San Diego Old Town in San Diego
+1-888-788-5576
2435 Jefferson St., San Diego, CA 92110 ~2.98 miles northeast of Shelter Island
  • Midscale Airport hotel
  • Gym is available on property
From$99
Very Good 4.0 /5 Guest Reviews Call BookMore Details
Old Town Western Inn & Suites
+1-888-897-9207
3889 Arista St., San Diego, CA 17448 ~3.00 miles northeast of Shelter Island
  • 3 star hotel
  • Check in: 4:00
From$90
Very Good 4.0 /5 Review Score Call BookMore Details
Western Inn - San Diego
+1-888-311-4278
3889 Arista St., San Diego, CA 92110 ~3.01 miles northeast of Shelter Island
  • Low-priced Suburban property
  • 35 sleeping rooms in hotel
From$99
Average 3.0 /5 Guest Reviews Call BookMore Details
Moore Place in San Diego
+1-888-469-4795
2254 Moore St., San Diego, CA 92110 ~3.04 miles northeast of Shelter Island
  • Two-star hotel
From$60
Very Good 4.0 /5 Hotel Reviews Call BookMore Details
Fairfield Inn & Suites by Marriott San Diego Old Town : 3900 Old Town Ave.
+1-888-734-9421
3900 Old Town Ave., San Diego, CA 92110 ~3.07 miles northeast of Shelter Island
  • Three Star Airport property
  • Comp. Breakfast
From$109
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Best Western Plus Hacienda Hotel Old Town : 4041 Harney St.
+1-888-841-5292
4041 Harney St., San Diego, CA 92110 ~3.17 miles northeast of Shelter Island
  • Three Star Airport hotel
  • 19 suites in property
From$99
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Holiday Inn Express Airport Old Town - San Diego
+1-888-455-5160
1955 San Diego Ave., San Diego, CA 92110 ~3.23 miles east of Shelter Island
  • 2 star Airport hotel
  • Check-in: 3:00pm
From$75
Very Good 4.0 /5 Latest Reviews Call BookMore Details
Hilton Garden Inn San Diego Old Town/SeaWorld Area : 4200 Taylor St.
+1-888-965-8297
4200 Taylor St., San Diego, CA 92110 ~3.24 miles northeast of Shelter Island
  • 3-star Suburban hotel
  • Check-in time: 3:00 PM
From$80
Very Good 4.0 /5 Reviews Call BookMore Details
The Bahia Resort Hotel
+1-888-906-6358
998 West Mission Bay Dr., San Diego, CA 92109 ~3.36 miles north of Shelter Island
  • Midscale Beach property
  • Check-in: 4p
From$119
Very Good 4.0 /5 Recent Reviews Call BookMore Details
Rent Mission Beach - San Diego
+1-888-749-6785
711 Island Court Mission Beach, San Diego, CA 92109 ~3.44 miles north of Shelter Island
  • Luxury 5-star property
From$100
Average 3.0 /5 Hotel Reviews Call BookMore Details
Paradise Point Resort & Spa : 1404 Vacation Rd.
+1-888-878-9982
1404 Vacation Rd., San Diego, CA 92109 ~3.60 miles north of Shelter Island
  • Expensive Beach hotel
  • Hotel has 30 meeting rooms
From$109
Very Good 4.0 /5 Recent Reviews Call BookMore Details

Next: See My Shelter Island Hotels with Pricing

Graph: Upcoming 20 Days of Shelter Island Hotel Rates

Rates shown are nightly rates before taxes and do not necessarily reflect all Shelter Island, CA discounts available. The chart reflects the cheapest Shelter Island hotel for each day and each star rating category.

FAQs about hotels in Shelter Island

What are the top reviewed hotels in Shelter Island?

Towneplace Stes Arpt Marriott, The Pearl Hotel and Sea Harbor Hotel are the best rated hotels based on customer reviews in the last 365 days.

What are the most up-scale hotels in Shelter Island?

Rent Mission Beach, Kona Kai Resort & Spa, A Noble House Resort and Sheraton San Diego Hotel and Marina are the top 3 luxury hotels near Shelter Island city center.

What hotels are closest to the city center of Shelter Island?

Sunrise Inn San Diego, The Pearl Hotel, and Hotel Point Loma are the properties closest to Shelter Island city center.

How much does a cheap hotel in Shelter Island cost per night?

In the last year, a 2 star hotel in Shelter Island can be as cheap as $87.46 per night. (based on HotelPlanner prices)

How much does a 3 star hotel in Shelter Island cost per night?

In the last year, the average 3 star hotel in Shelter Island has been $153.46 per night. (based on HotelPlanner prices)

How much does a high-end hotel in Shelter Island cost?

In the last year, the average 4 star hotel in Shelter Island has been $199.83 per night. (based on HotelPlanner prices)

What are the best independent hotels in Shelter Island?

The Pearl Hotel, Sea Harbor Hotel and The Bay Club Hotel & Marina are the best rated independent hotels (not part of a big brand).

What are the most popular Marriott hotels in Shelter Island?

Towneplace Stes Arpt Marriott, Courtyard by Marriott San Diego Airport and Sheraton San Diego Hotel and Marina are the best rated Marriott/Starwood branded hotels (based on customer reviews score).

What are the best Choice Hotels branded hotels in Shelter Island?

Comfort Inn San Diego at the Harbor and Comfort Inn San Diego Old Town are the best rated Choice Hotels branded hotels (based on HotelPlanner reviews score).

What are the best Best Western hotels in Shelter Island?

Best Western Yacht Harbor Hotel, Best Western Plus Island Palms Hotel & Marina and Best Western Plus Hacienda Hotel Old Town are the best rated Best Western branded hotels (based on user reviews score).

What are the best IHG hotels in Shelter Island?

Holiday Inn San Diego-Bayside, an IHG Hotel, Holiday Inn Express San Diego - SeaWorld Area, an IHG Hotel and Holiday Inn Express Airport Old Town are the best rated Intercontinental Hotel Group (IHG) branded hotels (based on user reviews score).

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